species:   Scscl
pid:       PID1642
parent:    Ssc-milR-118
paralog:   
locus:     NW_001820825.1:1149609-1149691
matures:   ['UGUAUAGAGCUUCGUACUCAAGA', 'GGAAUACGAAGGUCUAUAUAAU']
srr:       SRR12527895
genome:    /Users/jax/+Genomes/Fungal_genomes/Scscl.GCF_000146945.2_ASM14694v2.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527895.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527895.cram NW_001820825.1:1149609-1149691

1 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

          ************************              *************************          
GCUCCAAUGAUUGGAAUACGAAGGUCUAUAUAAUCAAGAUGGAUUCCCUUUGUAUAGAGCUUCGUACUCAAGAUCAAGAUCAA
.......(((((.((.(((((((.(((((((((....((.....))...))))))))).))))))).))..))))).......
--------------------------------------------------UGUAUAGAGCUUCGUACUCAAGA---------- l=23 a=0 c
------------GGAAUACGAAGGUCUAUAUAAU------------------------------------------------- l=22 a=0 c*
--------------------------------------------------UGUAUAGAGCUUCGUACUCAAGA---------- l=23 a=0 ma
------------GGAAUACGAAGGUCUAUAUAAU------------------------------------------------- l=22 a=0 ma*


No alignments to locus

mb-01011
ax-1011011
ku-01
ss-000110011100
fn-001
